Publications

Articles published in international refereed journals

Paoli, G. C., F. Soyer, J. M. Shively, and F. R. Tabita. “Rhodobacter capsulatus genes encoding form I ribulose-1,5-bisphospshate carboxylase/oxygenase (CbbLS) and neighboring genes were acquired by a horizontal gene transfer” Microbiol. 144:219-227. (1998)

Buonfiglio, V., M. Polidoroa, F. Soyer, P. Valenti, and J. Shively. “A novel gene encoding a sulfur-regulated outer membrane protein in Thiobacillus ferrooxidans” J. Biotech. 72: 85-93. (1999)

Cannon, G. C., S. H. Baker, F. Soyer, D. R. Johnson, C. E. Bradburne, J. L. Mehlman, P. S. Davies, Q. L. 

Jiang, S. Heinhorst, and J. M. Shively. “Organization of Carboxysome Genes in the Thiobacilli” Curr. Microbiol. 46(2):115-119. (2003)

Schmid M. F., A. M. Paredes, H. A. Khant, F. Soyer, H. C. Aldrich, W. Chiu and J. M. Shively. “Structure of Halothiobacillus neapolitanus Carboxysomes by Cryo-electron Tomography” J. Mol. Biol., 364:526–535 (2006)

Hasan Ture, Erdal Eroglu, Ferda Soyer, Banu Ozen. “Antifungal activity of biopolymers containing natamycin and rosemary extract against Aspergillus niger and Penicillium roquefortii” Int. J. Food Sci. Tech. 43:2026–2032 (2008)

Hasan Ture, Erdal Eroglu, Banu Ozen, Ferda Soyer. “Physical properties of biopolymers containing natamycin and rosemary extract” Int. J. Food Sci. Tech. 44: 402–408 (2009)

Karaosmanoglu H., F. Soyer, B. Ozen, F. Tokatli. “Antimicrobial and antioxidant activities of Turkish extra virgin olive oils” J. Agric. Food Chem. 58:8238-8245 (2010)

Hasan Ture, Erdal Eroglu, Banu Ozen, Ferda Soyer, “Effect of biopolymers containing natamycin against Aspergillus niger and Penicillium roquefortii on fresh kashar cheese” Int. Journal of Food Science and Technology, 46:1, 154-160 (2011)


Papers presented in international scientific meetings and published in proceedings

Soyer, F., L. Poole, and J. Shively. 1996. The isolation and sequence analysis of the cbbM and cbbR genes from Thiobacillus intermedius. Abs. Ann. Meeting Am. Soc. Microbiol. 1996:565

Soyer, F., B. Kusian, and J. M. Shively. 1997. Studies on CbbR, a RuBisCO gene regulator in Thiobacillus intermedius. Abs. Ann. Meeting Am. Soc. Microbiol. 1997:343

Soyer, F., C. Bradburne, and J. Shively. 1999. Studies on CbbR, a regulator of RuBisCO genes in Thiobacillus neapolitanus. Abs. Ann. Meeting Am. Soc. Microbiol. 1999:433

Soyer, F., J. Mehlman, M. Anderson, L. Goodwin, A. Gambrell, S. Baker, And J. Shively. 2000. Organization and sequence of carboxysome genes in Thiobacillus denitrificans. Abs. Ann. Meeting Am. Soc. Microbiol. 2000:378

Paredes, A. M., F. Soyer, H. C. Aldrich, S. Ludtke, H. Tsuruta, W. Chiu, and J. M. Shively. 2001. Three-dimensional structure of Thiobacillus neapolitanus carboxysomes as determined by cryo-electron microscopy. Abs. Ann. Meeting Am. Soc. Microbiol. 2001:441

Kim, K. P., T. Geng, F. Soyer, and A. K. Bhunia 2002. Increased transcription of lepA homologue, a GTP binding protein, in Listeria monocytogenes during heat stress. Abs. Ann. Meeting Inst. Food Tech. 2002:247

Eroglu E., H. Ture, F.Y. Ekinci, B. Ozen and F. Soyer. 2007 Interaction of Active Lactoferrin and Jenseniin G Against Foodborne Pathogens. Abs. Ann. Meeting Am. Soc. Microbiol. 2007:525

B8. Ture H., E. Eroglu, F. Soyer and B. Ozen. 2007 Antifungal Activities of Natamycin and Natamycin Incorporated Wheat Gluten and Methyl Cellulose Biofilms. Abs. Ann. Meeting Am. Soc. Microbiol. 2007:520

Soyer F., E. Eroglu, H. Ture and B. Ozen. 2007 Effect of Natural Antimicrobial Agents on Foodborne Pathogens. Abs. Ann. Meeting Am. Soc. Microbiol. 2007:526

Ture H., Eroglu E., Soyer F. and Ozen B., 2007 “Antifugal Activities of Natamycin and Natamycin Incorporated Biobased Films Against Penicillium roquefortii” 2nd International Congress on Food and Nutrition, October 24-26, Istanbul, 2007:226

Eroglu E., Ture H., Soyer F., and Ozen B., 2007 “Activity of Activated Lactoferrin on Listeria monocytogenes in Different Media Strength”, 2nd International Congress on Food and Nutrition, October 24-26, Istanbul, 2007:137 

Eroglu E., Ture H., Soyer F., and Ozen B., 2007 “Antimicrobial Effect of Natural Antimicrobial Agents on Food Borne Pathogenes Abs. 2nd Safoodnet Seminar, 2007:91

Ture H., Eroglu E., Soyer F., and Ozen B., 2007 Testing the Antimicrobial Properties of Edible Films Incoporated with Natamycin and Rosemary Extract Abs. 2nd Safoodnet Seminar, 2007:104

Soyer F., E. Eroglu, H. Ture and B. Ozen. 2009 Antimicrobial activities of activated lactoferrin and rosemary extract against L. monocytogenes on meat. Abs. 2nd SAFE Consortium International Congress on Food Safety, April 27-29, Girona, Spain, 2009:68

Karaosmanoglu H., Soyer F., Ocakoglu D., Tokatli F., Ozen B. 2009 Comparison and correlation of antimicrobial activities of Turkish olive oils with their phenolic contents. Abs. 2nd SAFE Consortium International Congress on Food Safety, April 27-29, Girona, Spain, 2009:134

Ayhan I., Baskan O., Cerit E. E., Soyer F., 2011 “Visualization and Outer Membrane Protein Characterization of Salmonella Enteritidis in the Presence of Rosmarinic Acid”, Proceedings of the 1st Int. Symposium on Secondary Metabolites: Chemical, Biological and Biotechnological Properties, p7, Denizli, September 2011.

Ozdemir O. O., Keman D., Soyer F., 2011 “Profiling of Outer Membrane Proteins of Salmonella Enteritidis in Response to 3-hydroxyphenylacetic Acid”, Proceedings of the 1st Int. Symposium on Secondary Metabolites: Chemical, Biological and Biotechnological Properties, p105, Denizli, September 2011.


Papers presented in international scientific meetings and published in proceedings

Soyer F., E. Eroglu, H. Ture, F. Y. Ekinci and F. B. Ozen. 2006 Dogal Bakteriostatik ve Bakteriyosidal Ajanlarin Gida Kaynakli Patojenler Uzerine Olan Etkileri. 32. Türk Mikrobiyoloji Kongresi özet Kitabi 2006: 386

Hasan Türe, Erdal Eroğlu, Ferda Soyer, Banu Özen. “Natamycin İçeren Antifungal Metil Selüloz Filmlerin Fiziksel Özellikleri” Gıda Kongresi 21-23 Mayıs 2008, Erzurum, Gıda Teknolojisi Dernegi Yayın No:37:1017-1020 (2008)